Mindstar Rising series
* _Mindstar Rising_ (1993)
* _A Quantum Murder_ (1994)
* _The Nano Flower_ (1995)
Night's Dawn trilogy
* _The Reality Dysfunction_ (1996)
* _The Neutronium Alchemist_ (1997)
* _The Naked God_ (1998)
Commonwealth Saga series
* _Pandora's Star_ (2004)
* _Judas Unchained_ (2005)
* _The Dreaming Void_ (2007)
Void trilogy
* _The Dreaming Void_ (2007)
* _The Temporal Void_ (2008)
* _The Evolutionary Void_ (2009)
Fallen Dragon series
* _Fallen Dragon_ (2010)
* _Renegade _ (2011)
* _Salvation_ (2012)
Great North Road
* _Great North Road_ (2012)
* _Manhattan in Reverse_ (2013)
* _The潰滅_(2014)
Other novels
* _Misspent Youth_ (1995)
* _Incognegro_ (2003)
* _Deathstalker Return_ (2007) (with Anne McCaffrey)
Short stories
* "Killing the Dead" (1992)
* "Footvote" (1996)
* "Sonnie's Edge" (1996)
* "Escape Route" (1996)
* "Summer's Lease" (1997)
* "Watching Trees Grow" (1997)
* "In the Flesh" (1998)
* "Soft Landing" (1998)
* "Neutron Jack" (1999)
* "Bethmoora" (2002)
* "A Second Chance at Eden" (2008)
* "If the Stars Die" (2009)
* "In Memoriam 01:01:2095" (2009)